Package: S4DM 0.0.2

S4DM: Small Sample Size Species Distribution Modeling

Implements a set of distribution modeling methods that are suited to species with small sample sizes (e.g., poorly sampled species or rare species). While these methods can also be used on well-sampled taxa, they are united by the fact that they can be utilized with relatively few data points. More details on the currently implemented methodologies can be found in Drake and Richards (2018) <doi:10.1002/ecs2.2373>, Drake (2015) <doi:10.1098/rsif.2015.0086>, and Drake (2014) <doi:10.1890/ES13-00202.1>.

Authors:Brian S. Maitner [aut, cre], Robert L. Richards [aut], Ben S. Carlson [aut], John M. Drake [aut], Cory Merow [aut]

S4DM_0.0.2.tar.gz
S4DM_0.0.2.zip(r-4.5)S4DM_0.0.2.zip(r-4.4)S4DM_0.0.2.zip(r-4.3)
S4DM_0.0.2.tgz(r-4.5-any)S4DM_0.0.2.tgz(r-4.4-any)S4DM_0.0.2.tgz(r-4.3-any)
S4DM_0.0.2.tar.gz(r-4.5-noble)S4DM_0.0.2.tar.gz(r-4.4-noble)
S4DM_0.0.2.tgz(r-4.4-emscripten)S4DM_0.0.2.tgz(r-4.3-emscripten)
S4DM.pdf |S4DM.html
S4DM/json (API)
NEWS

# Install 'S4DM' in R:
install.packages('S4DM', repos = c('https://bmaitner.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bmaitner/s4dm/issues

Datasets:

On CRAN:

Conda:

open-sciencerange-modellingrare-speciesspecies-distribution-modelingspecies-distribution-modelling

5.97 score 4 stars 33 scripts 188 downloads 12 exports 76 dependencies

Last updated 2 months agofrom:fcf3bcc33e. Checks:6 OK, 3 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 08 2025
R-4.5-winNOTEMar 08 2025
R-4.5-macNOTEMar 08 2025
R-4.5-linuxNOTEMar 08 2025
R-4.4-winOKMar 08 2025
R-4.4-macOKMar 08 2025
R-4.4-linuxOKMar 08 2025
R-4.3-winOKMar 08 2025
R-4.3-macOKMar 08 2025

Exports:ensemble_range_mapevaluate_range_mapfit_density_ratiofit_plug_and_playget_env_bgget_env_presmake_range_mapproject_density_ratioproject_plug_and_playsdm_thresholdstratify_randomstratify_spatial

Dependencies:abindassertthatBHbootclassclassIntclicodetoolscorpcorcubatureDBIdensratioDEoptimRdplyre1071fansifit.modelsflexclustforeachgenericsgeometryglmnetglueiteratorskde1dkernlabKernSmoothlatticelifecyclelinproglpSolvemagicmagrittrMASSMatrixMatrixModelsmaxnetmodeltoolsmvtnormnppcaPPpillarpkgconfigplyrpROCproxyquadprogquantregR6randtoolboxrbibutilsRcppRcppEigenRcppProgressRcppThreadRdpackrlangrngWELLrobustrobustbaserrcovrvinecopulibs2sfshapeSparseMsurvivalterratibbletidyselectunitsutf8vctrswdmwithrwk

S4DM R package

Rendered fromS4DM.Rmdusingknitr::rmarkdownon Mar 08 2025.

Last update: 2024-12-26
Started: 2024-12-16